Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015874183.1_cds_XP_016435397.1_31361
CDS Infomation

[gene=LOC107761664] [db_xref=GeneID:107761664] [protein=rho GTPase-activating protein 5-like] [protein_id=XP_016435397.1] [location=join(9538..9959,10902..11022,11116..11235,12270..12500,12682..13203)] [gbkey=CDS]
Sequence

ATGACTCGTCTGTTGCGATCCAAGTCGTATACATTTGGCCGTGTCTCTGCTTCCAACTCC
TCTGTTCTAGACTTGTCCCCTCGCTGCTCCTCTCTCTATGACTACGAAGAAGTAGGTGAT
GAGGAAGAAGGGGAAGATGGGTTTTTAAGTCCGGAACAGAGGCAACGGAGTCGGGTTCGG
GCTGCTGGTGGACGTCAGAGCAATCATAACAACCCCTCTCCAATTCTGGCGGTAGTTGTG
GCGGCGCTCCGGAAGTCGCTGGTGACTTGCAGTGTGGATAGAGATGACGTGGCTAACATG
GACATTGGATGGCCCACCGATGTCTGCCACGTTTCTCATGTCACCTTCGATCGCTTCGAT
GGCTTCCTTGGCCTCCCTATTGAGCTCCAGCCTGAAGTCCCCCGTAAAGTCCCCAGCGCA
AGTGTAAGTGTATTTGGGGTTTCTGTCCAGTCAATGCAATGTTCATATGACCTTAGAGGA
AACAGTGTGCCAACAATTCTTCTTAAACTGCAAAGTCATCTGTATACTGAAGGAGGCCTG
CAAGCAGAAGGAATATTCCGGATAAATGCTGAGAATAGTCAAGAAGAAACTGTGAGGAGC
CAGCTGAATAGAGGCATTGTTCCATATGGAATTGATGTTCATTGTTTGGCCGGATTGATT
AAGGCATGGTTTAGGGAGCTGCCTACAGGTGTACTAGATTCTCTAACCCCGGAGCAGGTG
ATGCACTGCAACACTGAAGAAGACTGCACCCAACTTGTGAACTTACTTCCTCCAACTGAA
GCTGCACTGCTTGACTGGGCAATCAATTTAATGGCAGACGTTGTGCATAATGAACATTAT
AACAAGATGAATGCAAGGAATATTGCCATGGTTTTTGCTCCAAACATGACTCAGATGGCT
GATCCATTGACTGCACTGATTCATGCAGTCCAAGTCATGAACCTCCTTAAGACACTCATT
ATGAAGACCCTTCGTGAAAGAGAAGAATCACATGTGACATGCCAAATACAGTCGTCATGT
GCTAATATTTCCAGTTGCATGGTAGATTATGTGGATGGCTATTCTTGTGAAAAACAAAAT
GCTGGTAAACTCTCAAGAAGTGCCACGTTAGACAGAACAGAATGTGAGTCGGGGGAGCAA
TTCTGGAACTGTAAGAGTACAAGTGATGCTGGAGAGGAATGTGATTCTGTTGTGAGGACC
TCTCCAGTTGCTCGCAGAAGACAAACACTAGAGAGTAGGTTTAGAGAGGGATTTGACACT
GAGGAGGGTGAGAACACAATGATTAGACTTAATTTAAGGAAGGGAATGCAAAAGCTATAC
AGGCATCCTGTATTTCAACTGAGTAAGCCAGTGAAGAAGAGCAGACTTATCGGGACTGTA
AATAGTAGGAGAGGAGGTGGAGAAGCATTGGCATGA

Peptide Sequence

PEP ID

XP_016435397.1
PEP Infomation

PREDICTED: rho GTPase-activating protein 5-like [Nicotiana tabacum]
Sequence

MTRLLRSKSYTFGRVSASNSSVLDLSPRCSSLYDYEEVGDEEEGEDGFLSPEQRQRSRVR
AAGGRQSNHNNPSPILAVVVAALRKSLVTCSVDRDDVANMDIGWPTDVCHVSHVTFDRFD
GFLGLPIELQPEVPRKVPSASVSVFGVSVQSMQCSYDLRGNSVPTILLKLQSHLYTEGGL
QAEGIFRINAENSQEETVRSQLNRGIVPYGIDVHCLAGLIKAWFRELPTGVLDSLTPEQV
MHCNTEEDCTQLVNLLPPTEAALLDWAINLMADVVHNEHYNKMNARNIAMVFAPNMTQMA
DPLTALIHAVQVMNLLKTLIMKTLREREESHVTCQIQSSCANISSCMVDYVDGYSCEKQN
AGKLSRSATLDRTECESGEQFWNCKSTSDAGEECDSVVRTSPVARRRQTLESRFREGFDT
EEGENTMIRLNLRKGMQKLYRHPVFQLSKPVKKSRLIGTVNSRRGGGEALA

Transcript Sequence

Gene sequence data has not been registered.